Package: OxyBS 1.5
OxyBS: Processing of Oxy-Bisulfite Microarray Data
Provides utilities for processing of Oxy-Bisulfite microarray data (e.g. via the Illumina Infinium platform, <http://www.illumina.com>) with tandem arrays, one using conventional bisulfite conversion, the other using oxy-bisulfite conversion.
Authors:
OxyBS_1.5.tar.gz
OxyBS_1.5.zip(r-4.5)OxyBS_1.5.zip(r-4.4)OxyBS_1.5.zip(r-4.3)
OxyBS_1.5.tgz(r-4.4-any)OxyBS_1.5.tgz(r-4.3-any)
OxyBS_1.5.tar.gz(r-4.5-noble)OxyBS_1.5.tar.gz(r-4.4-noble)
OxyBS_1.5.tgz(r-4.4-emscripten)OxyBS_1.5.tgz(r-4.3-emscripten)
OxyBS.pdf |OxyBS.html✨
OxyBS/json (API)
| # Install 'OxyBS' in R: |
| install.packages('OxyBS', repos = c('https://eahouseman.r-universe.dev', 'https://cloud.r-project.org')) |
- exampleMethBS - Sample Data: Methylation (red) signals from conventional bisulfite conversion.
- exampleMethOxBS - Sample Data: Methylation (red) signals from oxy-bisulfite conversion.
- exampleUnmethBS - Sample Data: Unmethylated (green) signals from conventional bisulfite conversion.
- exampleUnmethOxBS - Sample Data: Unmethylated (green) signals from oxy-bisulfite conversion.
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 8 years agofrom:45e8a684ce. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Sep 01 2024 |
| R-4.5-win | OK | Sep 01 2024 |
| R-4.5-linux | OK | Sep 01 2024 |
| R-4.4-win | OK | Sep 01 2024 |
| R-4.4-mac | OK | Sep 01 2024 |
| R-4.3-win | OK | Sep 01 2024 |
| R-4.3-mac | OK | Sep 01 2024 |
Exports:diffBeta1diffBeta2fitOneOxBSfitOxBSlikeOxBSscoreOxBS
Dependencies:
